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Omixer: multivariate and reproducible randomization to proactively counter batch effects in omics studies5 years ago
Introduction | Dependencies | Workflow | Creating Layouts | Automated Layouts | Subdivisions | Masking | Custom Layouts | Simple example | Randomization Variables | Running Omixer | Regenerating Layouts | Sample Sheets | Extended example | Creating Toy Data | Setting up Variables | Simple Randomization | Regenerating layouts | References | Session Info
MethylAid: Visual and Interactive quality control of Illumina Human DNA Methylation array data9 years ago
1 Introduction | 2 Quick start | 3 Example using presummarized DNA Methylation array data | 4 Example using 450k data downloaded from The Cancer Genome Atlas | 5 Example using 450k data downloaded from GEO | 6 Parallel summarization | 7 Customize MethylAid | 8 Session info